Efficacy Analysis Teal Demo App

App Info
Data Table
Variable Browser
Demographic Table
Kaplan Meier Plot
Response Table
Time To Event Table
Cross Table
Cox Reg
Logistic Reg
MMRM
Binary Response
ANCOVA
Report previewer

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Info about input data source

This app uses CDISC ADaM datasets randomly generated by `random.cdisc.data` R packages

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Show only distinct rows:

Active Filter Summary

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Show parent dataset variables

Reporter

File type

png

pdf

svg

File name (without extension)

Plot settings

ggplot2 theme

font size

rotate x labels

Active Filter Summary

One of transformators failed. Please check its inputs.

Reporter

Encodings Dataset: ADSL

Select Column Variable(s)

Select

Select ARM

Reshape long to wide format

Add All Patients column

Summarize Variables

Select

Select SEX, AGE, RACE

Reshape long to wide format

Additional table settings

Display NA counts

ifany

Choose the statistics to display for numeric variables

Mean (SD)

Mean 95% CI

Geometric Mean

Median

Median 95% CI

25% and 75%-ile

Min - Max

Denominator choice

omit

it's a BUG if you see this

File type

formatted txt

csv

pdf

File name (without extension)

Paginate table:

lines / page

Active Filter Summary

One of transformators failed. Please check its inputs.

Reporter

Encodings Datasets: ADSL, ADTTE

Select Endpoint Dataset: ADTTE

PARAMCD

Filter by

Filter by OS

Reshape long to wide format

Analysis Variable

Select

Select NULL

Reshape long to wide format

Censor Variable

Select

Select NULL

Reshape long to wide format

Facet Plots by Dataset: ADSL

Select

Select AGEGR1

Reshape long to wide format

Select Treatment Variable Dataset: ADSL

Select

Select ARM

Reshape long to wide format

Compare Treatments

Combine all comparison groups?

Stratify by Dataset: ADSL

Select

Select STRATA1

Reshape long to wide format

Comparison settings

p-value method for Coxph (Hazard Ratio)

wald

log-rank

likelihood

Ties for Coxph (Hazard Ratio)

exact

breslow

efron

Additional plot settings

Specify break intervals for x-axis e.g. 0 ; 500

Value on y-axis

Survival probability

Failure probability

Table Font Size

Relative Height of Plot (%)

Show CI ribbon

Show KM table

Level of Confidence

Level of Confidence 0.95

X-axis label

Time Unit Variable

Select

Select NULL

Reshape long to wide format

File type

png

pdf

svg

File name (without extension)

Active Filter Summary

One of transformators failed. Please check its inputs.

Reporter

Encodings Datasets: ADRS, ADSL

Parameter Dataset: ADRS

PARAMCD

Filter by

Filter by BESRSPI

Reshape long to wide format

Responders

Select Treatment Variable Dataset: ADSL

Select

Select ARM

Reshape long to wide format

Compare Treatments

Multiple reference groups are automatically combined into a single group.

Combine all comparison groups?

Unstratified analysis settings

Method for Difference of Proportions CI

Method for Difference of Proportions CI wald

Method for Difference of Proportions Test

Method for Difference of Proportions Test schouten

Odds Ratio Estimation

Stratified analysis settings

Stratification Factors Dataset: ADSL

Select

Select STRATA1

Reshape long to wide format

Method for Difference of Proportions CI

Method for Difference of Proportions CI cmh

Method for Difference of Proportions Test

Method for Difference of Proportions Test cmh

Add All Patients column

Additional table settings

Method for Proportion CI

Method for Proportion CI clopper-pearson

Confidence Level

Confidence Level 0.95

Show All Response Categories

Analysis Variable Dataset: ADRS

Select

Select NULL

Reshape long to wide format

File type

formatted txt

csv

pdf

File name (without extension)

Paginate table:

lines / page

Active Filter Summary

One of transformators failed. Please check its inputs.

Reporter

Encodings Datasets: ADSL, ADTTE

Select Endpoint Dataset: ADTTE

PARAMCD

Filter by

Filter by OS

Reshape long to wide format

Analysis Variable

Select

Select NULL

Reshape long to wide format

Censor Variable

Select

Select NULL

Reshape long to wide format

Select Treatment Variable Dataset: ADSL

Select

Select ARM

Reshape long to wide format

Compare Treatments

Combine all comparison groups?

Stratify by Dataset: ADSL

Select

Select STRATA1

Reshape long to wide format

Add All Patients column

Time Points

Time Points 182

Event Description Variable

Select

Select NULL

Reshape long to wide format

Comparison settings

p-value method for Coxph (Hazard Ratio)

wald

log-rank

likelihood

Ties for Coxph (Hazard Ratio)

exact

breslow

efron

Confidence Level for Coxph (Hazard Ratio)

Confidence Level for Coxph (Hazard Ratio) 0.95

Additional table settings

Confidence Level for Survfit (KM Median Estimate & Event Free Rate)

Confidence Level for Survfit (KM Median Estimate & Event Free Rate) 0.95

Confidence Level Type for Survfit

plain

log

log-log

KM Estimate Percentiles

Time Unit Variable

Select

Select NULL

Reshape long to wide format

File type

formatted txt

csv

pdf

File name (without extension)

Paginate table:

lines / page

Active Filter Summary

One of transformators failed. Please check its inputs.

Reporter

Encodings Dataset: ADSL

Row values

Select

Select STUDYID

Reshape long to wide format

Column values

Select

Select SITEID

Reshape long to wide format

Row to Column type of join

Row to Column type of join dplyr::full_join

Table settings

Show column percentage

Show total column

File type

formatted txt

csv

pdf

File name (without extension)

Paginate table:

lines / page

Active Filter Summary

One of transformators failed. Please check its inputs.

Reporter

Type of Regression:

Separate models for comparison groups with one covariate at a time

One model with all comparison groups and covariates

Encodings Datasets: ADSL, ADTTE

Select Endpoint Dataset: ADTTE

PARAMCD

OS

Reshape long to wide format

Censor Variable

Select

Select NULL

Reshape long to wide format

Analysis Variable

Select

Select NULL

Reshape long to wide format

Select Treatment Variable Dataset: ADSL

Select

Select ARM

Reshape long to wide format

Combine all comparison groups?

Covariates Dataset: ADSL

Select

Select AGE

Reshape long to wide format

Interaction terms

Stratify by Dataset: ADSL

Select

Select STRATA1

Reshape long to wide format

Additional table settings

p-value method for Coxph (Hazard Ratio)

wald

likelihood

Ties for Coxph (Hazard Ratio)

exact

breslow

efron

Confidence level for Coxph (Hazard Ratio)

0.95

File type

formatted txt

csv

pdf

File name (without extension)

Paginate table:

lines / page

Active Filter Summary

One of transformators failed. Please check its inputs.

Reporter

Encodings Datasets: ADSL, ADRS

Select Endpoint Dataset: ADRS

PARAMCD

Filter by

Filter by BESRSPI

Reshape long to wide format

Analysis Variable

Select

Select NULL

Reshape long to wide format

Responders

Select Treatment Variable Dataset: ADSL

Select

Select ARM

Reshape long to wide format

Combine all comparison groups?

Covariates Dataset: ADRS

Select

Select AGE

Reshape long to wide format

Confidence level for Coxph (Hazard Ratio)

0.95

File type

formatted txt

csv

pdf

File name (without extension)

Paginate table:

lines / page

Active Filter Summary

One of transformators failed. Please check its inputs.

Reporter

Encodings Datasets: ADSL, ADQS

Model Settings

Analysis Variable Dataset: ADQS

Select

Select AVAL

Reshape long to wide format

Select Endpoint Dataset: ADQS

PARAMCD

Filter by

Filter by FKSI-FWB

Reshape long to wide format

Visit Variable Dataset: ADQS

Select

Select AVISIT

Reshape long to wide format

Covariates Dataset: ADQS

Select

Select NULL

Reshape long to wide format

Split Covariates Dataset: ADQS

Select

Select NULL

Reshape long to wide format

Select Treatment Variable Dataset: ADSL

Select

Select ARM

Reshape long to wide format

Multiple reference groups are automatically combined into a single group.

Combine all comparison groups?

Subject Identifier Dataset: ADQS

Select

Select USUBJID

Reshape long to wide format

Weights for LS means

Correlation Structure

Adjustment Method

Adjustment Method Satterthwaite

Confidence Level

Confidence Level 0.95

Parallel Computing

Output Type

LS means table

LS means plots

Covariance estimate

Fixed effects

Fit statistics

Diagnostic plots

Output Settings

Show Relative Change

LS means plots

Estimates Contrasts

CI bar width

Show contrasts p-values

Diagnostic plot type

Fitted vs. Residuals

Normal Q-Q Plot of Residuals

Label observations above this threshold

File type

formatted txt

csv

pdf

File name (without extension)

Paginate table:

lines / page

File type

png

pdf

svg

File name (without extension)

Active Filter Summary

One of transformators failed. Please check its inputs.

Reporter

Encodings Datasets: ADRS, ADSL

Parameter Dataset: ADRS

PARAMCD

Filter by

Filter by BESRSPI

Reshape long to wide format

Responders

Select Treatment Variable Dataset: ADSL

Select

Select ARM

Reshape long to wide format

Compare Treatments

Multiple reference groups are automatically combined into a single group.

Combine all comparison groups?

Unstratified analysis settings

Method for Difference of Proportions CI

Method for Difference of Proportions CI waldcc

Method for Difference of Proportions Test

Method for Difference of Proportions Test schouten

Odds Ratio Estimation

Stratified analysis settings

Stratification Factors Dataset: ADSL

Select

Select STRATA1

Reshape long to wide format

Method for Difference of Proportions CI

Method for Difference of Proportions CI cmh

Method for Difference of Proportions Test

Method for Difference of Proportions Test cmh

Add All Patients column

Additional table settings

Method for Proportion CI

Method for Proportion CI waldcc

Confidence Level

Confidence Level 0.95

Show All Response Categories

Analysis Variable Dataset: ADRS

Select

Select NULL

Reshape long to wide format

File type

formatted txt

csv

pdf

File name (without extension)

Paginate table:

lines / page

Active Filter Summary

One of transformators failed. Please check its inputs.

Reporter

Encodings Datasets: ADSL, ADQS

Analysis Visit Dataset: ADQS

AVISIT

Filter by

Filter by WEEK 1 DAY 8

Select

Select AVISIT

Reshape long to wide format

Select Endpoint Dataset: ADQS

PARAMCD

Filter by

Filter by FKSI-FWB

Reshape long to wide format

Analysis Variable Dataset: ADQS

Select

Select CHG

Reshape long to wide format

Select Treatment Variable Dataset: ADSL

Select

Select ARM

Reshape long to wide format

Combine all comparison groups?

Covariates Dataset: ADQS

Select

Select STRATA1

Reshape long to wide format

Confidence Level

Confidence Level 0.95

Include Interaction Term

Select Interaction Variable Dataset: ADQS

Select

Select NULL

Reshape long to wide format

Select Interaction y

File type

formatted txt

csv

pdf

File name (without extension)

Paginate table:

lines / page

Active Filter Summary

One of transformators failed. Please check its inputs.